Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935510.1_cds_XP_016481301.1_72644
CDS Infomation

[gene=LOC107802342] [db_xref=GeneID:107802342] [protein=L-ascorbate oxidase homolog] [protein_id=XP_016481301.1] [location=join(11559..11696,11833..11942,14351..14621,15742..15844,15948..16293,16407..16769,16852..16930,17044..17256)] [gbkey=CDS]
Sequence

ATGGTGCCGCTAAAAATCGCAATAGCGGCATTTTTAGTGGTAGGATTAGTTGTGAATACA
GTAGCAGAAGATCCTTATAGATTCTTCGAGTGGAATGTTACTTATGGCACTATTTATCCT
CTTGGAGTTCCTCAACAGGGAATTTTGATCAATGGCCAATTTCCTGGACCTGATATTTAC
TCTGTTACTAATGACAATCTCATTATCAACGTTTTCAACAGCTTGGATGAGCCTTTTCTT
CTTTCCTGGAATGGAATACAAAACAGAAGAAACTCATTTGAAGACGGAGTATATGGTACA
ACATGCCCAATACCACCAGGAAAAAACTTCACATACATTCTACAAATGAAAGATCAAATA
GGGAGTTATTACTATTTCCCTTCTCTTGCATTTCACAAAGCTGCTGGTGGTTTCGGAGGA
ATTAAAATTCTCAGCAGGCCTAGAATTCCCGTTCCTTTCCCGGACCCTGCAGACGATTAC
ACTGTCCTCATTGGAGATTGGTACAAGAAAAACCACACGGCGTTGAAAGCAATTCTTGAT
GGAGGAAAGAAGTTACCTTTTCCTGATGGCATTCTTATCAATGGACGTGGACCTAATGGT
GTTTCTTTCACAGTTGAGCAAGGGAAAACTTATAGACTGAGGATATCCAATGTTGGATTA
CAAAATTCGTTGAATTTCCGTATTGAGGGACACAAGATGAAATTAGTTGAAGTAGAGGGA
ACACACACATTGCAAACTACCTATTCCTCACTTGATGTTCATGTTGGCCAAACCTACTCT
GTCCTCATTACAGCTGATCAAGAAGCTAAAGATCACTACATAGTCGTTTCATCGCGTTTC
ACATCTCCGGTCCTCACTACCACCGGTGTACTTCATTATAGTAACTCTAACACCCCCGTC
TCCGGTCCTCCTCCTGGTGGTCCTACCATCCAAATCGACTGGTCCCTTAACCAGGCTCGA
TCCATCAGGACAAACTTGTCGGCAAGTGGACCAAGGCCAAATCCACAAGGTTCATACCAT
TATGGTATGATCAACACAACCCGAACCATCAGACTTGCTAGTTCTGCTGGTCAAGTGAAT
GGCAAACAGAGATATGCAGTCAACAGCGTGTCGTTTGTGCCACTTGATACTCCTCTCAAG
CTTCTTGACTACTTCAAAGTTGGTGGATTCCGCGTTGGAAGCATATCTGATGCTCCAAGT
GGTGGAGGAATTTTCCTAGACACGTCTGTTCTAGGCGCTGATTACAGGCAATTCATTGAG
ATTGTATTCGAGAACAATGAGGATATCGTTCAAAGCTGGCATCTTAATGGCTACTCTTTC
TGGGTTGTAGGGATGGATGGAGGGCAGTGGACTCAAGCTAGTAGAAACGGATACAATCTT
CGTGATGCAGTTGCACGTTGCACAACTCAGGTGTATCCTAAGTCATGGACTGCAATATAT
ATTGCATTGGACAATGTAGGAATGTGGAACCTAAGGACTGAATTTTGGGCACGACAATAC
CTCGGACAACAATTATACATGAGAGTTTACACTACATCAACTTCTTTGAGAGACGAATAT
CCAATTCCAAGGAACGCTCGTCTTTGTGGCAAAGTGGCTGGCCGGCACACACGACCACTT
TAA

Peptide Sequence

PEP ID

XP_016481301.1
PEP Infomation

PREDICTED: L-ascorbate oxidase homolog [Nicotiana tabacum]
Sequence

MVPLKIAIAAFLVVGLVVNTVAEDPYRFFEWNVTYGTIYPLGVPQQGILINGQFPGPDIY
SVTNDNLIINVFNSLDEPFLLSWNGIQNRRNSFEDGVYGTTCPIPPGKNFTYILQMKDQI
GSYYYFPSLAFHKAAGGFGGIKILSRPRIPVPFPDPADDYTVLIGDWYKKNHTALKAILD
GGKKLPFPDGILINGRGPNGVSFTVEQGKTYRLRISNVGLQNSLNFRIEGHKMKLVEVEG
THTLQTTYSSLDVHVGQTYSVLITADQEAKDHYIVVSSRFTSPVLTTTGVLHYSNSNTPV
SGPPPGGPTIQIDWSLNQARSIRTNLSASGPRPNPQGSYHYGMINTTRTIRLASSAGQVN
GKQRYAVNSVSFVPLDTPLKLLDYFKVGGFRVGSISDAPSGGGIFLDTSVLGADYRQFIE
IVFENNEDIVQSWHLNGYSFWVVGMDGGQWTQASRNGYNLRDAVARCTTQVYPKSWTAIY
IALDNVGMWNLRTEFWARQYLGQQLYMRVYTTSTSLRDEYPIPRNARLCGKVAGRHTRPL

Transcript Sequence

Gene sequence data has not been registered.